Comparison of sequencing methods and data processing pipelines for whole genome sequencing and minority single nucleotide variant (mSNV) analysis during an influenza A/H5N8 outbreak

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Authors: Marjolein J. Poen, Anne Pohlmann, Clara Amid, Theo M. Bestebroer, Sharon M. Brookes, Ian H. Brown, Helen Everett, Claudia M. E. Schapendonk, Rachel D. Scheuer, Saskia L. Smits, Martin Beer, Ron A. M. Fouchier, Richard J. Ellis

Journal title: PLOS ONE

Journal number: 15/2

Journal publisher: Public Library of Science

Published year: 2020

Published pages: e0229326

DOI identifier: 10.1371/journal.pone.0229326

ISSN: 1932-6203